codebase / stimlib

…atement, this commit is still using ivote due to instability with the LaG version

…stability changes. STABLE- PRECYLINDER WORK

…r algorithms. Now using ~400 position and ~100 size templates.

…There is a bug where the point where we split the end-hit fiber is not added merged in properly

…and not glObj. glObj is still there for redundancy

…f call to branch detection as well as well as branching points added in the border regions (where the branch outpoint is outside of the search space)

…r's Bind and Unbind methods have been made public to lower the number of times they are called

…features (will probably be implemented in another class). Has not been tested. Renamed all instances of mathvec.h with vector.h

…, and setMatrix. Added a -scalar method to the mathvec.h class that fixed a segfault

…allow the new vector to function. Added general convenience push methods to the mathvec class, as well as changed a convenience constructor to a size constructor, many small fixes

… genTemplate method and redistributed it's functionality into genDirectionVectors, genPositionVectors, genMagnitudeVectors. Renamed variable to make the names shorter and easier to use. Removed a number of calls to Bind() and Unbind(). Removed a constructor and added a destructor. TO DO: replace the fillMatrix method with a function call.

…around the center of the spider with the same radius as the spider.

…le functions. Tested and works fine, but cannot handle some cases. genTemplate is now called only three times; during initialization.

…s for handling the update implementation (compatible with vectors). Added comments and fixes to cost.h, minor changes to matrix.h, and vect.h in order to facilitate moving into 4D vector notation.

… the positionTemplate function to do the 4-step transformation instead of 3. Added comments

…the size of the volume (num of slices) instead of hard coding.

…n and the angle between two arbitrary vectors. Added a function for recovering the transformation matrix in order to progress the dir, pos and magnitudes of the spider.TO DO: move hardcoded dimensions of the search space (# of slices) into variables inherited from gl_texture.

…thod, now works with translation and scaling, added more debugging code to print out information to console. overloaded positionTemplate for easier testing.