Commit a60b78291db5bb4cee0e9d1d7fe4ada7f8c3fea8
Merge branch 'cellset_save' into 'master'
add save to cellset.h See merge request !5
Showing
1 changed file
with
20 additions
and
0 deletions
Show diff stats
stim/biomodels/cellset.h
| @@ -167,6 +167,26 @@ public: | @@ -167,6 +167,26 @@ public: | ||
| 167 | cells.push_back(newcell); //push the new memory entry into the cell array | 167 | cells.push_back(newcell); //push the new memory entry into the cell array |
| 168 | } | 168 | } |
| 169 | 169 | ||
| 170 | +void save(std::string filename){ | ||
| 171 | + | ||
| 172 | + | ||
| 173 | + size_t ncells = cells.size(); // get the number of cells | ||
| 174 | + std::ofstream file(filename); //open a file to store the cell's coordinates | ||
| 175 | + if (file.is_open()) { | ||
| 176 | + | ||
| 177 | + file << "x y z radius\n"; //write the file header | ||
| 178 | + for (size_t c=0; c < ncells; c++){ //for each cell | ||
| 179 | + if (cells[c][ip[3]] != NULL) //check if for the current cell, radius has been assigned | ||
| 180 | + file << cells[c][ip[0]] << delim << cells[c][ip[1]] << delim << cells[c][ip[2]] << delim << cells[c][ip[3]] << '\n' ; | ||
| 181 | + else //check if for the current cell, radius has not been assigned, set radius to zero | ||
| 182 | + file << cells[c][ip[0]] << delim << cells[c][ip[1]] << delim << cells[c][ip[2]] << delim << 0 << '\n' ; | ||
| 183 | + } | ||
| 184 | + | ||
| 185 | + } | ||
| 186 | + file.close(); | ||
| 187 | + | ||
| 188 | + } | ||
| 189 | + | ||
| 170 | 190 | ||
| 171 | }; //end class cellset | 191 | }; //end class cellset |
| 172 | }; //end namespace stim | 192 | }; //end namespace stim |