deprecated / bimsim

  #include "sphere.h"

  #include "rts/optics/material.h"

  #include <vector>
  //#include "rts/complex.h"
  
  #include "nearfield.h"
  //nearfieldStruct* NF;
  
  #include "microscope.h"
  microscopeStruct* SCOPE;
  
  #include "fieldslice.h"
  
  #include "fileout.h"
  #include "options.h"
  #include "montecarlo.h"

  #include "rts/math/point.h"
  #include "rts/math/spherical_bessel.h"
  #include "rts/math/matrix.h"
  #include "rts/math/quaternion.h"

  #include "rts/envi/envi.h"

  
  #include "warnings.h"
  
  fileoutStruct gFileOut;

  bool verbose = false;

  using namespace std;
  
  int cbessjyva(double v,complex<double> z,double &vm,complex<double>*cjv,

      complex<double>*cyv,complex<double>*cjvp,complex<double>*cyvp);
  
  int main(int argc, char *argv[])
  {

  
  	SCOPE = new microscopeStruct();
  

      LoadParameters(argc, argv);
  

  	//initialize GPU memory for fields
  	SCOPE->init();
  

  	gFileOut.Save(SCOPE);
  

  	if(verbose)
          OutputOptions();
  

  	SCOPE->destroy();
  
  

  
  }