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The STIM library is a template-based source repository that encapsulates most of the functionality of the software produced by the Scalable Tissue Imaging and Modeling Laboratory at the University of Houston.

Matlab/Octave functions for managing data sets.

Software for viewing and manipulating hyperspectral images using a GUI interface.

CMake environment variables for libraries: ANN_PATH - path to the Approximate Nearest Neighbor library files BOOST_ROOT - path to the root directory for BOOST GLEW_PATH - path to the GLEW library

Refractive Index Calculator - this software is used to calculate different optical properties of materials, including refractive index, scattering efficiency, and absorbance

Accurate Flow in Augmented Networks (AFAN) software.

GPU-based genetic algorithm feature selector based on LDA.

A GUI interface for the Multiple-Sphere T Matrix (MSTM) package. This includes a CMake file for compiling the original Fortran code as well as the necessary Python scripts for the GUI.

Converts a file or list of files to the netpbm (*.pgm, *.ppm) format

Broadband Interactive Mie Simulation - This software is simulates and visualizes Mie scattering through spheres using GPU-based parallel computation.

Hypersnakuscules - a 3-dimensional extension of snakuscules.

Hyperspectral image processing library designed to deal with extremely large images using data streaming.

Converts slides from proprietary image formats (Nanozoomer, Aperio, etc) into standard formats using OpenSlide and OpenCV.